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1

Algorithms for Combining Rooted Triplets into a Galled Phylogenetic Network

Jansson, Jesper, Nguyen, Nguyen Bao, Sung, Wing-Kin

Journal:

SIAM Journal on Computing

Year:

2006

Language:

english

File:

PDF, 326 KB

english, 2006

2

Deletion of the WD40 Domain of LRRK2 in Zebrafish Causes Parkinsonism-Like Loss of Neurons and Locomotive Defect

Sheng, Donglai, Qu, Dianbo, Kwok, Ken Hon Hung, Ng, Seok Shin, Lim, Adrian Yin Ming, Aw, Sharon Siqi, Lee, Charlie Wah Heng, Sung, Wing Kin, Tan, Eng King, Lufkin, Thomas, Jesuthasan, Suresh, Sinnakar

Journal:

Year:

2010

Language:

english

File:

PDF, 1.39 MB

english, 2010

3

Induction chemotherapy with cisplatin and gemcitabine followed by accelerated radiotherapy and concurrent cisplatin in patients with stage IV(A-B) nasopharyngeal carcinoma

Tsz-Kok Yau, Anne Wing-Mui Lee, Dominique Hiu-Ming Wong, Rebecca Mei-Wan Yeung, Elian Wing-Kin Chan, Wai-Tong Ng, Macy Tong, Inda Sung Soong

Journal:

Year:

2006

Language:

english

File:

PDF, 136 KB

english, 2006

4

Chromatin interaction networks and higher order architectures of eukaryotic genomes

Kuljeet Singh Sandhu, Guoliang Li, Wing-Kin Sung, Yijun Ruan

Journal:

Journal of Cellular Biochemistry

Year:

2011

Language:

english

File:

PDF, 159 KB

english, 2011

5

Inferring a level-1 phylogenetic network from a dense set of rooted triplets

Jesper Jansson, Wing-Kin Sung

Journal:

Theoretical Computer Science

Year:

2006

Language:

english

File:

PDF, 298 KB

english, 2006

6

A Space and Time Efficient Algorithm for Constructing Compressed Suffix Arrays

Wing-Kai Hon, Tak-Wah Lam, Kunihiko Sadakane, Wing-Kin Sung, Siu-Ming Yiu

Journal:

Year:

2007

Language:

english

File:

PDF, 196 KB

english, 2007

7

Fast algorithms for computing the tripartition-based distance between phylogenetic networks

Nguyen Bao Nguyen, C. Thach Nguyen, Wing-Kin Sung

Journal:

Journal of Combinatorial Optimization

Year:

2007

Language:

english

File:

PDF, 577 KB

english, 2007

8

Computing the Maximum Agreement of Phylogenetic Networks

Charles Choy, Jesper Jansson, Kunihiko Sadakane, Wing-Kin Sung

Journal:

Electronic Notes in Theoretical Computer Science

Year:

2004

Language:

english

File:

PDF, 240 KB

english, 2004

9

Ultra-succinct representation of ordered trees with applications

Jesper Jansson, Kunihiko Sadakane, Wing-Kin Sung

Journal:

Journal of Computer and System Sciences

Year:

2012

Language:

english

File:

PDF, 288 KB

english, 2012

10

Succinct data structures for Searchable Partial Sums with optimal worst-case performance

Wing-Kai Hon, Kunihiko Sadakane, Wing-Kin Sung

Journal:

Theoretical Computer Science

Year:

2011

Language:

english

File:

PDF, 319 KB

english, 2011

11

More efficient periodic traversal in anonymous undirected graphs

Jurek Czyzowicz, Stefan Dobrev, Leszek Gąsieniec, David Ilcinkas, Jesper Jansson, Ralf Klasing, Ioannis Lignos, Russell Martin, Kunihiko Sadakane, Wing-Kin Sung

Journal:

Theoretical Computer Science

Year:

2012

Language:

english

File:

PDF, 435 KB

english, 2012

12

ChIA-PET analysis of transcriptional chromatin interactions

Jingyao Zhang, Huay Mei Poh, Su Qin Peh, Yee Yen Sia, Guoliang Li, Fabianus Hendriyan Mulawadi, Yufen Goh, Melissa J. Fullwood, Wing-Kin Sung, Xiaoan Ruan, Yijun Ruan

Journal:

Year:

2012

Language:

english

File:

PDF, 1.19 MB

english, 2012

13

Breaking a Time-and-Space Barrier in Constructing Full-Text Indices

Hon, Wing-Kai, Sadakane, Kunihiko, Sung, Wing-Kin

Journal:

SIAM Journal on Computing

Year:

2009

Language:

english

File:

PDF, 277 KB

english, 2009

14

Simultaneously Learning DNA Motif Along with Its Position and Sequence Rank Preferences Through Expectation Maximization Algorithm

Zhang, ZhiZhuo, Chang, Cheng Wei, Hugo, Willy, Cheung, Edwin, Sung, Wing-Kin

Journal:

Journal of Computational Biology

Year:

2013

Language:

english

File:

PDF, 447 KB

english, 2013

15

Linked Dynamic Tries with Applications to LZ-Compression in Sublinear Time and Space

Jansson, Jesper, Sadakane, Kunihiko, Sung, Wing-Kin

Journal:

Year:

2015

Language:

english

File:

PDF, 684 KB

english, 2015

16

Fast relative Lempel–Ziv self-index for similar sequences

Do, Huy Hoang, Jansson, Jesper, Sadakane, Kunihiko, Sung, Wing-Kin

Journal:

Theoretical Computer Science

Year:

2014

Language:

english

File:

PDF, 553 KB

english, 2014

17

Polynomial-Time Algorithms for Building a Consensus MUL-Tree

Cui, Yun, Jansson, Jesper, Sung, Wing-Kin

Journal:

Journal of Computational Biology

Year:

2012

Language:

english

File:

PDF, 938 KB

english, 2012

18

An $O(m \log m)$-time algorithm for detecting superbubbles

Sung, Wing-Kin, Sadakane, Kunihiko, Shibuya, Tetsuo, Belorkar, Abha, Pyrogova, Iana

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Year:

2014

Language:

english

File:

PDF, 1.30 MB

english, 2014

19

PROTEIN STRUCTURE AND FOLD PREDICTION USING TREE-AUGMENTED NAÏVE BAYESIAN CLASSIFIER

CHINNASAMY, ARUNKUMAR, SUNG, WING-KIN, MITTAL, ANKUSH

Journal:

Journal of Bioinformatics and Computational Biology

Year:

2005

Language:

english

File:

PDF, 403 KB

english, 2005

20

[IEEE IEEE GLOBECOM 1998 - Sydney,NSW,Australia (8-12 Nov. 1998)] IEEE GLOBECOM 1998 (Cat. NO. 98CH36250) - An adaptive fixed-step power control algorithm based on link quality measure

Chi Wan Sung,, Kin Kwong Leung,, Wing Shing Wong,

Year:

1998

Language:

english

File:

PDF, 303 KB

english, 1998

21

Intrinsic mechanisms of neural stem cell reactivation

Li, Song, Tan, Patrick, Sung, Wing-Kin, Wang, Hongyan

Journal:

Mechanisms of Development

Year:

2017

Language:

english

File:

PDF, 41 KB

english, 2017

22

An intrinsic mechanism controls reactivation of neural stem cells by spindle matrix proteins

Li, Song, Koe, Chwee Tat, Tay, Su Ting, Tan, Angie Lay Keng, Zhang, Shenli, Zhang, Yingjie, Tan, Patrick, Sung, Wing-Kin, Wang, Hongyan

Journal:

Nature Communications

Year:

2017

Language:

english

File:

PDF, 4.27 MB

english, 2017

23

[Lecture Notes in Computer Science] WALCOM: Algorithms and Computation Volume 10755 || On Structural Parameterizations of Happy Coloring, Empire Coloring and Boxicity

Rahman, M. Sohel, Sung, Wing-Kin, Uehara, Ryuhei

Year:

2018

Language:

english

File:

PDF, 308 KB

english, 2018

24

[Lecture Notes in Computer Science] Combinatorial Algorithms Volume 10979 || On the Area Requirements of Straight-Line Orthogonal Drawings of Ternary Trees

Iliopoulos, Costas, Leong, Hon Wai, Sung, Wing-Kin

Year:

2018

Language:

english

File:

PDF, 431 KB

english, 2018

25

[Lecture Notes in Computer Science] Combinatorial Algorithms Volume 10979 || Branch-and-Bound Algorithm for Symmetric Travelling Salesman Problem

Iliopoulos, Costas, Leong, Hon Wai, Sung, Wing-Kin

Year:

2018

Language:

english

File:

PDF, 307 KB

english, 2018

26

[Lecture Notes in Computer Science] WALCOM: Algorithms and Computation Volume 12049 (14th International Conference, WALCOM 2020, Singapore, Singapore, March 31 â April 2, 2020, Proceedings) ||

Rahman, M. Sohel, Sadakane, Kunihiko, Sung, Wing-Kin

Year:

2020

Language:

english

File:

PDF, 11.59 MB

english, 2020

27

An Even Faster and More Unifying Algorithm for Comparing Trees via Unbalanced Bipartite Matchings

Ming-Yang Kao, Tak-Wah Lam, Wing-Kin Sung, Hing-Fung Ting

Journal:

Journal of Algorithms

Year:

2001

Language:

english

File:

PDF, 185 KB

english, 2001

28

Probabilistic prediction of protein–protein interactions from the protein sequences

Arunkumar Chinnasamy, Ankush Mittal, Wing-Kin Sung

Journal:

Computers in Biology and Medicine

Year:

2006

Language:

english

File:

PDF, 501 KB

english, 2006

29

Model gene network by semi-fixed Bayesian network

Tie-Fei Liu, Wing-Kin Sung, Ankush Mittal

Journal:

Expert Systems with Applications

Year:

2006

Language:

english

File:

PDF, 303 KB

english, 2006

30

Non-shared edges and nearest neighbor interchanges revisited

Wing-Kai Hon, Ming-Yang Kao, Tak-Wah Lam, Wing-Kin Sung, Siu-Ming Yiu

Journal:

Information Processing Letters

Year:

2004

Language:

english

File:

PDF, 171 KB

english, 2004

31

Computing the maximum agreement of phylogenetic networks

Charles Choy, Jesper Jansson, Kunihiko Sadakane, Wing-Kin Sung

Journal:

Theoretical Computer Science

Year:

2005

Language:

english

File:

PDF, 254 KB

english, 2005

32

Approximate string matching using compressed suffix arrays

Trinh N.D. Huynh, Wing-Kai Hon, Tak-Wah Lam, Wing-Kin Sung

Journal:

Theoretical Computer Science

Year:

2006

Language:

english

File:

PDF, 224 KB

english, 2006

33

Rooted Maximum Agreement Supertrees

Jesper Jansson, Joseph H.-K. Ng, Kunihiko Sadakane, Wing-Kin Sung

Journal:

Year:

2005

Language:

english

File:

PDF, 252 KB

english, 2005

34

A Faster and More Space-Efficient Algorithm for Inferring Arc-Annotations of RNA Sequences through Alignment

Jesper Jansson, See-Kiong Ng, Wing-Kin Sung, Hugo Willy

Journal:

Year:

2006

Language:

english

File:

PDF, 253 KB

english, 2006

35

Improved Approximate String Matching Using

Tak-Wah Lam, Wing-Kin Sung, Swee-Seong Wong

Journal:

Year:

2008

Language:

english

File:

PDF, 396 KB

english, 2008

36

Compressed Indexes for

Ho-Leung Chan, Tak-Wah Lam, Wing-Kin Sung, Siu-Lung Tam, Swee-Seong Wong

Journal:

Year:

2010

Language:

english

File:

PDF, 592 KB

english, 2010

37

Improved Algorithms for Maximum Agreement and

Viet Tung Hoang, Wing-Kin Sung

Journal:

Year:

2011

Language:

english

File:

PDF, 657 KB

english, 2011

38

AP-2γ regulates oestrogen receptor-mediated long-range chromatin interaction and gene transcription

Tan, Si Kee, Lin, Zhen Hua, Chang, Cheng Wei, Varang, Vipin, Chng, Kern Rei, Pan, You Fu, Yong, Eu Leong, Sung, Wing Kin, Cheung, Edwin

Journal:

The EMBO Journal

Year:

2011

Language:

english

File:

PDF, 1.98 MB

english, 2011

39

Gene identification signature (GIS) analysis for transcriptome characterization and genome annotation

Ng, Patrick, Wei, Chia-Lin, Sung, Wing-Kin, Chiu, Kuo Ping, Lipovich, Leonard, Ang, Chin Chin, Gupta, Sanjay, Shahab, Atif, Ridwan, Azmi, Wong, Chee Hong

Journal:

Year:

2005

Language:

english

File:

PDF, 409 KB

english, 2005

40

The Enhanced Double Digest Problem for DNA Physical Mapping

Ming-Yang Kao, Jared Samet, Wing-Kin Sung

Journal:

Journal of Combinatorial Optimization

Year:

2003

Language:

english

File:

PDF, 91 KB

english, 2003

41

Computational modeling of oligonucleotide positional densities for human promoter prediction

Vipin Narang, Wing-Kin Sung, Ankush Mittal

Journal:

Artificial Intelligence in Medicine

Year:

2005

Language:

english

File:

PDF, 584 KB

english, 2005

42

A linear size index for approximate pattern matching

Ho-Leung Chan, Tak-Wah Lam, Wing-Kin Sung, Siu-Lung Tam, Swee-Seong Wong

Journal:

Journal of Discrete Algorithms

Year:

2011

Language:

english

File:

PDF, 178 KB

english, 2011

43

A quality-based fixed-step power control algorithm with adaptive target threshold

Chi Wan Sung, Kin Kwong Leung, Wing Shing Wong

Journal:

IEEE Transactions on Vehicular Technology

Year:

2000

Language:

english

File:

PDF, 213 KB

english, 2000

44

Bioinformatics Applications in Genomics

Journal:

Year:

2012

Language:

english

File:

PDF, 1.85 MB

english, 2012

45

Convergence theorem for a general class of power-control algorithms

Kin Kwong Leung, Chi Wan Sung, Wing Shing Wong, Lok, T.M.

Journal:

IEEE Transactions on Communications

Year:

2004

Language:

english

File:

PDF, 459 KB

english, 2004

46

Protein subcellular localization prediction for Gram-negative bacteria using amino acid subalphabets and a combination of multiple support vector machines

Jiren Wang, Wing-Kin Sung, Arun Krishnan, Kuo-Bin Li

Journal:

BMC Bioinformatics

Year:

2005

Language:

english

File:

PDF, 287 KB

english, 2005

47

PET-Tool: a software suite for comprehensive processing and managing of Paired-End diTag (PET) sequence data

Kuo Ping Chiu, Chee-Hong Wong, Qiongyu Chen, Pramila Ariyaratne, Hong Sain Ooi, Chia-Lin Wei, Wing-Kin Ken Sung, Yijun Ruan

Journal:

BMC Bioinformatics

Year:

2006

Language:

english

File:

PDF, 2.48 MB

english, 2006

48

A correlated motif approach for finding short linear motifs from protein interaction networks

Soon-Heng Tan, Willy Hugo, Wing-Kin Sung, See-Kiong Ng

Journal:

BMC Bioinformatics

Year:

2006

Language:

english

File:

PDF, 883 KB

english, 2006

49

Using indirect protein interactions for the prediction of Gene Ontology functions

Hon Nian Chua, Wing-Kin Sung, Limsoon Wong

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 1.14 MB

english, 2007

50

LOMA: A fast method to generate efficient tagged-random primers despite amplification bias of random PCR on pathogens

Wah Heng Lee, Christopher W Wong, Wan Yee Leong, Lance D Miller, Wing Kin Sung

Journal:

BMC Bioinformatics

Year:

2008

Language:

english

File:

PDF, 732 KB

english, 2008